I have infected the mice foot pad with Mycobacterium marinum and my goal is to monitor the footpad swelling using digital caliper and then check the footpad cfu after termination.

My question is where exactly on the footpad should we measure? as the swelling kind of starts in the mid footpad region and then spreads towards the tarsal joint and digits. 

Has anyone done this kind of study? from which region of footpad do you measure the swelling or do you just average the total by measuring front, mid and back of the footpad? 

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