When I slide-mount Diptera specimens, I typically macerate them for ca 24% at room temperature in 10% KOH (pH between 12.5 and 12.8). This removes a lot of muscle tissue and pigments, and make it easier to observe internal sclerotized structures. I then neutralize the specimens in 99% acetic acid (for ca 5-10 minutes) and dehydrate them in ethanol before mounting them in euparal on microscope slides for permanent storage.
Recently I received some specimens that already have been treated with DNA extraction buffer (pH approximately 8) for 18 hours. They are already somewhat pale; but I don't know to which extent this is from the alkality of the solution or from the enzymes in the buffer solution. I am concerned that following my standard procedure of 24% KOH at room temperature will make them too pale to be used for morphological studies.
Does anyone have experience with making permanent slides of arthropod material after immersion in DNA extraction buffer? How can I account for the partial maceration of the material when modifying my protocol?
Regards, Gunnar