Mireille Kameni
Hello,
I didn't work on PiMP platform, but I do worked on Metaboanalyst. I most important think in metaboanalyst is the data entry as csv file. First check your saved csv file. It should have sample name in columns and metabolites in rows. The MS id and other details are not required when you work in metaboanalyst.
So, my recommendation is create a new csv file with sample name, metabolites and their concentrations only.
Thank you and all the best. If you have any further query you can always mail me...
thank you very much Nishanth Sekar
effectively my .csv file does not have metabolite names but instead ms1 peak identity. so I am looking for a way to relate this id to metabolites names.
Thank you once for your kind reply.
Mireille Kameni
In that case, first you can identify the metabolite name of ms1 peak using NIST library or XCMS software wherein you have to upload raw data, and proceed further.