How to generate working ligand-protein complex pdb file for further molecular dynamics run?

the atom order in ligand shows mismatch and thus i cannot proceed to next step

31 July 2020 8,946 6 View

Which important microorganism which destroy deemak (Termite) in agriculture soil or land eg safed musali cultivation or any rhizome crop?

we have problem in our field experiment of safed musali (Chlorophytum borivilianum ) cultivation. there is attack of termite in the soil which damage the roots in plant. we approached for organic...

02 September 2019 8,488 1 View

Can PCR master mix solution be prepared in advance and stored at -20C?

For doing PCR, instead of preparing the PCR mater mix solution each and every time, is it advisable to prepare it in a larger quantity and store it at -20C so that the PCR can be set up faster....

27 January 2019 7,112 19 View

How can I plot grains as a point in an inverse pole figure map using TSL OIM software?

A figure like the given one.

29 August 2017 3,374 2 View

How o calculate impedance in hfss using polar plot

I am trying get results from the hfss after design information an antenna and wanted to find if my impedance is matched or not.at 50om .so how can I do that....thanks in advance

18 May 2017 948 5 View

Tieing Eulerian material to Lagrangian body/surface?

Hello, I am trying to tie a Eulerian object to a Lagrangian body or surface in order to give the Eulerian material translational and angular velocities using ABAQUS/CAE. In the ABAQUS...

07 March 2017 7,230 6 View

How to do deconvolution of peaks of XPS (X ray Photoelectron spectra)?

There are many softwares available, but can I know how to analyze XPS using origin or qtiplot etc plotting software?

01 February 2017 2,486 3 View

Can some please suggest which program to use for energy minimization for batch of proteins?

I have created multiple mutations of a single protein and I need to carry out energy minimization of those mutants to check stability. Please suggest some program or software or script.

08 November 2016 417 3 View

How to avoid this warning in Silvaco?

No ionization integrals possible at this bias point. Possibly applied voltage is less than DELTAV in field line calculation or the electrode does not contact any semiconductor material.

20 October 2016 8,761 2 View

Abnormal temperature profile in ABAQUS/explicit using CEL model ?

Hello Everyone ! I'm doing analysis of a welding process using Coupled Eulerian-Lagrangian approach in ABAQUS/explicit. I have created a model (two layers of workpiece, one eulerian part, and a...

21 June 2016 9,323 10 View

I have designed reflectarray element and feeding it though Horn Antenna on HFSS. After full wave simulation, I am not getting desired results?

I have designed reflectarray element to generate OAM beams at 5.8GHz and feeding it though Horn Antenna on HFSS. After full wave simulation, i am not getting desired results i.e Radiation pattern...

01 March 2021 9,701 5 View

Is there a method of determining feed digestibility without the need to re-pellet the feed?

I am aiming to determine the ADC values of a commercial fish feed, but I do not have a steam pelleter or extruder available to me. Ideally, the pellets could be coated with some inert marker....

28 February 2021 7,967 3 View

Microstrip antenna design tutorial of HFSS 3D layout module ?

I have designed a 24 GHz rectangular antenna on HFSS 3D model and got desired results while desing the same antenna with same dimensions I am getting resonance frequency at 27 GHz I am...

28 February 2021 4,426 2 View

What is Flat Lens Antenna?

28 February 2021 5,433 3 View

Compact antenna for the frequency range 1 MHz-5 MHz?

Hello everybody! I have a problem with developing a compact antenna for the 1MHz-5MHz frequency range. Tell me what type of antenna can be used and what books and articles to read to perform this...

27 February 2021 7,710 4 View

Can impedance of antenna be less than 50 ohms?

I am simulating helix antenna in hfss, right now, giving excitation with 50 ohms port. When I see the results of Z parameter (real). It shows lower than 50 ohms. Do not understand, if it can be...

27 February 2021 4,218 7 View

Efficiency of Proximity Feed Patch Antenna ?

Greetings to all of You! I have searched some research papers for the designing of a proximity coupled patch antenna. Researchers are talking about the impedance bandwidth of the antenna but...

24 February 2021 7,662 3 View

2D or 3D phased array antennas??

Dear All, I will start my PhD maybe this year regarding phased array antennas. I'm interested in to find more detailed information about 3D phased array antennas and 2D phased array antennas. Then...

21 February 2021 368 3 View

Helix antenna coupling problem?

Dealing with a helix antenna, made with flexible material and not rigid like using a PCB board or wire. At the beginning of the helix is too close to the ground plane, causing coupling. How can I...

21 February 2021 4,453 3 View

Aspen Plus Error: Unknown or undefined bead number?

Hello, in my Aspen Plus Simulation (see attachment) there are two heat exchangers. One HEX1 (oil+gas) ist fed by hot gas which ist coming out of a burner. The other HEX2 (gas+gas) shall work as a...

14 February 2021 8,096 2 View