How to calculate the change of a protein channel diameter in during simulation time?

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Martiniano Bello

Hi Farzane,

trj_cavity can be useful for that analysis.

https://sourceforge.net/projects/trjcavity/

Martin Klvana

Caver: caver.cz

Farzane Abasi

Martiniano Bello and Martin Klvana thank you for your replies.

Nikhil Maroli

HOLE program can be used to analyse the pore diamter of a channel.