How to take the system for MM-PBSA calculation? DNA with one protein or DNA with both proteins simultaneously?
Suggestions for different suitable free energy methods are appreciated.
Thank you Anwesh Pandey
Arunima Verma check this tutorial:
https://valdes-tresanco-ms.github.io/gmx_MMPBSA/dev/examples/Protein_DNA
Thank you very much Mario E. Valdés-Tresanco
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