It is often possible to observe on publications phylogenetic trees whose indices support nodes are from different phylogenetic methods.
Is there a program or script to generate a phylogenetic tree comprising, Distance ML, NJ and Bayesian?
Thank's for your help !
Hi Thibaut
A program such as Poy can be used to read in the "best" trees chosen by various methods (ML, etc) and then give you jackknife support (or bootstrap if you want that) for all of those trees, on a consensus tree. Poy will also save your tree in Newick format and as a pdf.
Perhaps that is not exactly what you wanted, but such a tree is useful.
Good luck
Stephen
You can import support values from different trees in TreeGraph. The basic prerequisite is that the names and quantity of the leaves are identical. If the topology differs, support values will be plotted to the branch in square brackets.
http://treegraph.bioinfweb.info/
MEGA 6 contains all the methods except MrBayes.. There is no shortcut for bayesian tree..
Have I missed the point of this question? Why would you want to combine the results of different searches? The shortest tree length is optimal, why combine it with suboptimal solutions?
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