How do we indicate Polymorphism?

Mona Zamanian Azodi @Mona_Zamanian_Azodi

10 October 2015 0 3K Report

Hi,

In which ways it is possible to indicate polymorphism? Is it just by the prefix "rs"? or there are other ways too? such as A–A haplotype , (R7)

Thanks

Badges
Science topic

Similar topics
Biological Science
Genetics

More Mona Zamanian Azodi's questions See All

How many controls or samples can I compare in GEO2R ?

Hi, I would like to know how many controls can I compare to my samples in GEO2R? What I mean is, if I choose 10 samples should I compare them with just 10 controls or It is possible to add more...

03 April 2016 9,799 2 View

How can I choose from different gene ontology terms for SimUl method ?

I have a problem choosing from different for example biological processes that GO consortium provides me for a specific protein. I would like to compare two proteins with SimUI method ( graph...

31 December 2015 3,012 0 View

How can I calculate Q measure and MC in r statistical software?

I would like to how it is possible to calculate Q measure and MC for cluster quality comparison in r statistical programme? Thanks

31 December 2015 8,050 3 View

Has anyone used " SERVA Quick Coomassie™ Stain" for 2D?

Has anyone used " SERVA Quick Coomassie™ Stain" for 2D? Thanks

11 December 2015 5,305 4 View

Is it possible to use polymorphism and variant interchangeably?

Is it possible to use polymorphism and variant interchangeably? And what are different kinds of genetic variations? I encountered with the term splice variant! Thanks in advance!

09 October 2015 5,607 2 View

Reference manager

What is a good reference management software for Mac ? Thanks

07 August 2014 3,622 3 View

Why did the authors extrapolate a phenotype that they experimentally proved in one bacterial strain across the whole genus of the organism?

I aim to be as skeptical as possible regarding whether a pair of orthologous genes results in the same phenotype in their different but related bacterial organisms under similar environmental...

05 August 2024 6,787 4 View

Why my colony PCR results of my recombinant bacterial not showing any results?

I am performing ligation of the plasmid and a target gene. The steps I have taken are: 1. Double digestion of the plasmid and target gene 2. Ligation of the plasmid with the target gene 3....

05 August 2024 2,570 3 View

What is the acceptable p-value cutoff for GO enrichment analysis ?

I have an RNA-seq data that I have analysed using Limma-voom and have extracted the gene IDs, log2FC and the p-values. At p value < 0.05, I have over 10,000 DEGs, however, when I run the GO...

31 July 2024 225 2 View

Inquiry on Maximum Nucleic Acid Volume for 2.5 mL Liposome Solution?

I am currently working on a project involving liposomes and need to determine the maximum volume of siRNA that can be added to a 2.5 mL liposome solution with a total lipid concentration of 10...

30 July 2024 6,420 1 View

Are these cassettes suitable for expressing PETase mutant in E. coli?

I created two potential gene expression cassettes (constitutive and inducible) for expression of a mutant PETase gene on PeptiCloud using the version tree feature, which allows users to create...

28 July 2024 7,559 1 View

Optimal siRNA Volume for Complexation with Liposomes in a 2.5 mL Solution with 10 mg/mL Lipid Concentration?

How much volume of siRNA can I add to 2.5 mL of liposomes with a total lipid concentration of 10 mg/mL?

27 July 2024 6,920 1 View

If my gene of interest has high GC content can it be problematic in sequencing? What kind of error is expected with GC rich gene sequences??

Gene sequencing related trouble shooting

25 July 2024 4,149 2 View

Why my negative control siRNA is decreasing the target gene's expression?

Hi Everyone, I'm using an siRNA kit to knock down a target gene. The kit guarantees that the negative control doesn't target any sequence in mouse genome, and when I use BLAST I don't find any...

23 July 2024 2,673 6 View

Are there any alternatives to PhenoScanner?

I am currently conducting a mendelian randomization study, and I was attempting to use PhenoScanner to look for potential confounders associated with the selected SNPs (any SNPs significantly...

23 July 2024 5,703 0 View

Analysis of MHC-I and II alleles with CNVs and unassigned loci?

I am working on a dataset of MHC-I and II alleles from a bird species sequenced with Illumina. We were not able to assign alleles to loci through MHC-typer as we were over the limit of 150 alleles...

15 July 2024 182 1 View