The third output, i.e. "probEstimates", gives a (somehow) normalized version of the values of discriminant function. I think you can use it as the discriminant values.
Still wants to clarify more about my peroblem. My problem has 6 classes. After creating model file using RBF kernel , I want to use my own kernel in which I want to use value of decision function, which i am getting using standard RBF kernel. How do I get it from LIBSVM? I am using MATLAB interface of LIBSVM.
In my problem, there are more than 70 features and 6 classes. It is multi classification problem. During training using one-to-one algorithm svm is doing training. So, it is difficult to extract dec-vaule.