How can identify the genes after Trinity assembly (de novo)?

01 November 2022 1 9K Report

I have files with TRINITY id code and differential expressed values as well as the p values after a de novo transcriptome assemply. What is the proccess after this step to identify which are the genes that I have the differential expression for?

Govindkumar Balagannavar

check the trinity output directory for Trinity.fasta file and perform a blast using the closest species transcriptome/genome.

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