I was thinking about VGlut2 (presynaptic) and PSD95 (post-synaptic) for the excitatory synapses, and VGAT (presynaptic) and Gephrin (post-synaptic) for the inhibitory ones.
Should I define as a synapse only the areas of colocalization between pre and post synaptic marker? Or should I consider also the isolate VGlut2/VGAT and PSD95/Gephrin ?