I have BioCyc enzyme/pathway features that I want to represent as phylogeny, in an image. Is there any tool/database that can be used for this purpose.
What type of data do you have ? Protein sequence or nucleotide sequence ? If you have either go ahead and use clustal w or mega and make a phylogenetic tree
Thank you very much. I don't have protein sequence data, but have predicted Biocyc pathway ID's derived from microbiome OTU abundances. I can think of linking to KEGG Go ID's and use the sequences on Mega or R.