I've been applying shock to a 3D cardiac model, but I want to change the algorithm that accounts for the ionic source term. How are the CHASTE cardiac downloadable CellML and .out files for the DiFrancesco Noble 1985, Faber Rudy 2000, Hodgkin Huxley 1952, .... models generated? If you're not familiar with CHASTE, my general question is what's the quickest way to generate a CellML file given a defined model, its ODEs, and the # of variables. And then, from that CellML file how are .out files produced?
Thanks.
This is how CellML models are generated given any cell model (https://www.cellml.org/getting-started/tutorials/opencell-model-building-tutorial). But, I still don't know how .out files are generated.
Thanks.
This is how .out files are generated -> https://github.com/Chaste/cellml/blob/master/GenerateMapleOutputFiles.py
Thanks.
- Badges
- Science topic
- Similar topics
- Bioinformatics
- Bioinformatics and Computational Biology