I have been unable to get useful results from the REGA HIV-1 subtyping tool for the past 48 hours (link below). Although my sequences are uploaded in the FASTA format (less than 10 sequences at a time), the software constantly returns an empty *.csv file. Has anyone had the same problem? If not, could somebody help me to find what is going wrong? Thank you beforehand!
http://www.bioafrica.net/rega-genotype/html/subtypinghiv.html
It seems to be down right now. I sent a note to the site owner to ask about fixing it.
Have you now been able to resolve the issue, as I use REGA often and have never had any issues with it. You can simply paste your sequences in the box allocated directly without need for uploading it as a FASTA file. I have pasted 30 sequences at a time and got my results back in less than half an hour. regards
Hi Omotayo. Thank you very much for your message. I have tried again now with 10 sequences and did not get any result. Maybe I am using a wrong website (http://bioafrica.mrc.ac.za/rega-genotype/genotype.php?cmd=list&job=1424390294). It only takes few seconds to run the analysis but always return an empty *.csv file and nothing appears on the screen (see attached files).
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