Hi all,

I have recently expressed recombinnt IL-4 using insect cell baculovirus system. I have coexpressed in with GST to create an GST-IL-4 fusion protein. Running it on a WB revealed it to be the correct size. I went on to purify using affinity columns and again followed by concentration using vivaspin columns. I got a single band on coomassie gel and WB. I stored the protein in 10% glycerol at -20C (elution buffer had 300mM NaCl, 100mM Tris pH 8.8, 2mM DTT, 20mM Glutathione). I went on to do a functional assay on the GST-IL4 protein withour cleaving where I measured CD23 on B cells from PBMCs by flow cytometry but it did not work at any concentrations used. I intend to cleave the GST tag but just to check functionlity, I did they assay precleavage.

Now the protein was freezed/thawed a couple times (I know I should have aliquoted it)

and there was some degradation. However, I do not think it was completely degreaded and expected to get at least some activity

I have a few questions:

1. Will a couple freeze thaw cycles completely denature the protein so that there is no activity

2 could the GST tag be interfering with the binding site on the B cells? I know it depends on the protein but how likely is it?

3 After harvesting, I purify and concentrate doing all on separate days (hence the freeze thaw). I know I should do all the steps all at once to minimize degradation but are there any other ways to reduce degradation?

4. whats the best way to store purified protein to be used in functional experiments i.e. what % of glycerol is enough to prevent freezing of protein but not interfere with functional assays

Any advice would be appreciated. I am really getting frustrated here

Thanks very much

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