Which software can be used for docking of peptide having unusual amino acids?

Hi friends I want to dock a peptide having modified amino acids. I tried with many free software but that are not able to dock that peptide because of modified amino acids. Can any one suggest me...

09 October 2018 7,001 1 View

What can be the loading control for western blotting of bacterial cell lysate.?

Hi i want to do protein expression study of bacteria at different time and sugar. In this condition what can be the loading control but i can not use GAPDH because i am using different sugars....

10 November 2017 191 6 View

Sample preparation for Native PAGE?

Hi please suggest me a procedure of sample preparation for native PAGE. I am working on Gram Positive Bacteria that is highly resistant. I tried to break this with sonication using very high...

11 December 2016 2,769 5 View

SDS-PAGE: Protein bands broaden as it migrates down the gel.?

08 September 2016 6,319 14 View

Why Absorbance is increasing after mixing with hydrocarbon in Hydrophobicity assay (MATH).?

Hi I am working on bacterial resistance and i want to do cell surface hydrophobicity assay. I tried to do this assay 3-4 time but i am not getting result. The problem is that resistant stains show...

04 May 2016 7,237 3 View

MD MOE RMSD

How to calculate the RMSD values for a MD simulation using MOE?

07 August 2021 0 0 View

MD MOE RMSD

How to calculate the RMSD values for a MD simulation using MOE?

07 August 2021 0 0 View

fatal error

When I tried to energy minimization my system, I got fatal error as below. Fatal error: Atomtype opls_116 not found Although I've already added this line: ; include water #include "oplsaa.ff/spc.itp" to [molecultype] directive in my topology.

16 June 2021 0 0 View

fatal error

When I tried to energy minimization my system, I got fatal error as below. Fatal error: Atomtype opls_116 not found Although I've already added this line: ; include water #include "oplsaa.ff/spc.itp" to [molecultype] directive in my topology.

16 June 2021 0 0 View

fatal error

When I tried to energy minimization my system, I got fatal error as below. Fatal error: Atomtype opls_116 not found Although I've already added this line: ; include water #include "oplsaa.ff/spc.itp" to [molecultype] directive in my topology.

16 June 2021 0 0 View

fatal error

When I tried to energy minimization my system, I got fatal error as below. Fatal error: Atomtype opls_116 not found Although I've already added this line: ; include water #include "oplsaa.ff/spc.itp" to [molecultype] directive in my topology.

16 June 2021 0 0 View

What kind of fluid could I use for a pitfall trap that also does not invalidate molecular testing?

Hi, I want to start testing pitfall trap to obtain ants samples, but I need to conduct molecular analysis on those insects. So, what kind of fluid can I use? Ethanol expires too early and I need...

03 March 2021 5,978 5 View

No title

02 March 2021 3,060 3 View

How to repeat an operation on an atom selection for multiple times in PyMol?

Hi, I am trying to construct a multi-layer fibril structure from a single layer in PyMol by translating the layer along the fibril axis. For now, I am able to use the Translate command in PyMol...

02 March 2021 4,569 4 View

New Journal, "Integrative Psychological and Behavioral Science" -- do you not know, and have you not seen, this done before?

Question to you and THEM, the New Journal, "Integrative Psychological and Behavioral Science" -- do you not know, and have you not seen, this done before? There appears to be a core problem for...

02 March 2021 3,024 2 View