What protocol does everyone use for fixation of tissues prior to putting them in sucrose to prepare them for OCT? I'm using these sections for multiplexing and have issues because the tissue is not fixed well.
Hallo Rebecca, it depends on the kind of tissue. Most commen fixativ is eithe 4% bufferedFormalin (ca.38 %) or better 4% Paraformaldehyd in PBS pH 7.4. If you are woking with animals I recommand to perfuse them with this fixativ. After the perfusoin stay 1 additional day in the fixativ and then put it in 30% succrose until it will sank on the bottom of the vial.
I thought I will just share my protocol, which seems to be working for me:
I normally work with animals, so, I will first profuse the animal with fixative (4% PFA or 4% formalin) and quickly harvest the tissue of interest. Then, the harvested tissues are incubated in 4% fixative for a max of 6 hrs (This is because over fixation can also cause autofluorescence during IHC-and this can be very annoying). After fixing, tissue can be cryoprotected in 20% sucrose for overnight or till it sinks to the bottom.
The 4% PFA needs to be fresh as it only lasts for 5-7 days and it needs to be diluted in a buffer. We make up 20% then dilute with a stock buffer and pH to 7.4 before making up to the final volume.
What tissue? What species? How big a bit of tissue? Beware 4% PFA (does go off), 4% formaldehyde and 10% formalin are all the same concentration of formaldehyde. But its easy to get the concentration wrong. I use 10% neutral buffered formalin (10% NBF) as it avoids the creation of formalin pigment artefact.