Estimation Fst values in R?

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Dávid Nagy U

Hi Lakshmi,

You can take a look on diveRsity package:

ftp://cran.r-project.org/pub/R/web/packages/diveRsity/diveRsity.pdf

In addition you can try adegenet and hierfstat packages also.

I also suggest an other program to calculate Fst. Spagedi is very easy to use

http://ebe.ulb.ac.be/ebe/SPAGeDi.html

Lakshmi Pathy Thalambedu

Thank u David, but can these packages be used if the data is binary, like scoring a marker for its presence or absence

Antonella Soro

https://popgen.nescent.org