I am looking for sequence assembly software and I tried the DNA dragon software. I found it good, but I don't know if it can be cited in a publication.
Thank you stephen for your reply. I never used codoncode and clcbio, but Geneious; yes. I'll try them and see.
You could try VectorFriends at http://www.vectorfriends.com
It supports Muscle and Clustalw and is free for academic researchers
you can also use seqscanner http://www.appliedbiosystems.com/absite/us/en/home/support/software-community/free-ab-software.html
it may help
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