I tried to do a Slot Blot and was not successful and melatonin is only .23 Kda so it would probably run off a western blot. Has anyone had success with other methods?
You can try chemiluminescence method which is based on the emission of chemiluminescence when melatonin reacts with hydrogen peroxide and acetonitrile under alkaline conditions.
You can also try determining melatonin spectrophotometrically after reaction with potassium permanganate and formaldehyde in acid medium.