I am testing various anticancer drugs onto several cell lines. I test the cytotoxicity based on 72hr incubation with drugs and assayed via MTS. I keep on getting low absorbance for negative control compared to treated cell lines at low dose of anticancer drugs, I tried PrestoBlue and yielded the same results. My question is; how to explain this phenomena where cell line treated with low dose of anticancer drugs has higher absorbance than negative control, non-treated cells? The expected result is the sigmoidal curve while I obtained a higher peak at low dose (more than control). I tried to find journals explaining this but I could not find one as most graphs in journals managed to get good sigmoidal curve with best fit line at R2 at least 0.9 whereas mine below 0.9. I am using graphpad and excel for comparison.

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