Can anyone suggest some literature sites for MALDI analysis? I would like some detailed description of the method so that I can plan my experiment accordingly.
I have to agree with the previous posters that there is a lot of literature out there. I think it would be helpful if you describe what kind of method you would like to employ on which kind of proteins as there are different approaches.
However, if you are interested in the basic principles first, there is a nice article from Gary Siuzdak in Encyclopedia of Analytical Chemistry (not a website but a really good resource book) although it is a bit old but not necessarily outdated:
Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry in Peptide and Protein Analysis. J. Kathleen Lewis, Jing Wei, Gary Siuzdak, Encyclopedia of Analytical Chemistry, pp. 5880–5894