I want to do fluorescence imaging of Lncap cells transfected with GFP-AR and treated with Testosterone. So what stock should i make of DAPI and what final working concentration should i use for imaging?
You can try 1:500 dilution of 5.0mg/ml stock. You can incubate for 3-4 minutes and optimize time accordingly. Permeablize the cells prior to DAPI staining and do the DAPI staining in a buffer without any detergent such as IX PBS without (Triton-X100).
Then wash with with 1XPBS for 5-10 minutes and mount sample.
Other way of staining with DAPI is to use a mount media with DAPI such as Vectashield with DAPI.