Create a SDF file for molecular docking?

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Yang Wang

Pymol

save molecule

*.sdf

Andres Felipe Cuspoca Orduz

Do you know a server to create a ligand with the output in SDF file format.? I dont have the peptide in question and I have to create de novo in silico.

Mokhtar Nosrati

Hi, openbabel is a good molecule viewer and format convert, you can try with it.

thanks a lot!

Salman Sadullah Usmani

Go with openbabel.

Amit Kumar Gupta

Openbabel could be a good choice