Andres Felipe Cuspoca Orduz

6 Questions 8 Answers 0 Followers

Questions related from Andres Felipe Cuspoca Orduz

What is the best approach for E. coli phylogenetics?

I have four whole genomes sequencing of E. coli isolates , and I wanna to classify in phylogenetics groups. Whats is the best ways? Thanks.

01 January 2020 4,715 1 View

Does any one have idea about mmpbsa for change the temperature?

I need calculate MM/PBSA with MMPBSA.py but in output file "MMPBSA_info" the temperature is marked for default in -INPUT['temp'] = 298.15 and y need run that analysis in 310 k, I looking in...

08 August 2019 10,043 2 View

Where can find the complete information associated with a Series Matrix Files in an Gene Expression Omnibus?

Where can find the complete information (normalization, samples and any previous analysis) associated with a Series Matrix Files in an Gene Expression Omnibus accession ?

11 November 2018 8,099 0 View

How can I perform a consensus tree from results of the same BEAST file ran on different computers?

- I have several .tree files derived from the same BEAST file ran on different computers but I need to perform a consensus on those trees, is there a program for that?

09 September 2018 4,635 4 View

Create a SDF file for molecular docking?

What program or server, can i utilized for construct a peptide for molecular docking in silico? the output must be in SDF file.

07 July 2018 2,557 6 View

What is the best server or software to design peptides to perform docking?

What is the best server or software to design peptides to perform docking? I refer acuracity terms.

06 June 2018 7,414 3 View