I am curious about nickel-bead cleaning. After native protein purification, I washed the nickel bead with 2 column volume of 2M Imidazole to remove the non-specific binding protein. But after washing, the top of the bead was still brown. I thought that proteins aggregation happened in my column. Some protocol suggested that 8M urea or 6M Guanidine-HCl can be used as well as denature column. However, I don't sure about this because my column used for native purification not for denature.
Can I use urea for native purification column cleaning?