Yes you can transfer a 6kDa protein with nitrocellulose membrane (0.2um). I perform western blot assays with a protein at 10kDa and highly recommend using the Life Technologies Bolt® 4-12% Bis-Tris Plus Gel, 10 well gel running system and then the Life Technologies XCell II™ Blot Module system for the transfer of protein. Just ensure when running the protein gel that the gel markers are very well separated. Hope this helps.
I agree with Anita Pinar. I would only add the recommendation of using MOPS buffer to run the 4-12% gels. You get a better resolution at the 6 KDa area of the gel.
We have done it repeatedly with adrenomedullin, another 6KDa protein. You can see our published protocols:
Martínez A, Miller MJ, Unsworth EJ, Siegfried JM, Cuttitta F. Expression of adrenomedullin in normal human lung and in pulmonary tumors. Endocrinology 136:4099-4105 (1995).
Montuenga LM, Martínez A, Miller MJ, Unsworth EJ, Cuttitta F. Expression of adrenomedullin and its receptor during embryogenesis suggests autocrine or paracrine modes of action. Endocrinology 138: 440-451 (1997).
Serrano J, Fernández AP, Sánchez J, Rodrigo J, Martínez A. Adrenomedullin expression is up-regulated by acute hypobaric hypoxia in the cerebral cortex of the adult rat. Brain Pathology, 18:434-442 (2008).
Sackett DL, Ozbun L, Zudaire E, Wessner L, Chirgwin JM, Cuttitta F, Martínez A.
Intracellular proadrenomedullin-derived peptides decorate the microtubules and contribute to cytoskeleton function. Endocrinology, 149:2888-2898 (2008).
Thank you all. I have read some paper and all of them recommended to coat the membranes with gelatin before transfer and fix with formaldehyde after that. Furthermore, various authors recommend to use 15-20 gels. I'll try all procedures. Thank you!