Tomas Koltai , Hi Tomas Koltai, do you have any reference about the fact that cetuximab does not recognize mouse epitopes? I am currently looking for Kd in mouse tissus but I haven't found something yet.
Looking at structure 1YY9 and comparing the UniProt sequences of human and mouse EGFR, 5 out of 7 contact residues in the huEGFR-Cetuximab complex are different in the mouse sequence.
No - these are sequences pulled from SwissProt/UniProt (www.expasy.org), which I aligned and colored according to similarity using a homemade EXCEL vba macro. I Identified contact residues using PyMOL in structure 1YY9 (www.rcsb.org) and marked the contact residues in the sequence alignment. The sequence difference in the epitope explains the lack of cross-reactivity mentioned in the paper cited in my first response. If you need something to cite for the sequence difference/epitope, you may use "A.Honegger, personal communication" ; )