Can anyone suggest a way to download "KEGG" pathway database?

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Jonathan David Moore

I think it is necessary to pay for access if you want to download the whole database.

Sanjay Lamba

Dear Jonathan

I want download only particular database related to my research area. I don't need download full database. If you have any idea then please suggest me.

Urvah Shabbir

In R you can do it using KEGGREST library.

#load KEGGREST library

library(KEGGREST)

# list databases you can use

listDatabases()

#check the organism code

org

Malik Yousef

Dear Sanjay Lamba

Can you report what was the best way to get the

KEGG" pathway database?

Best

Malik

Eunice O. Adedeji

Dear Claudia Cava,

Please can you shed more light on this

Dear Claudia Cava

Manali Singha

Hi I want to download all data from Kegg database . Can anyone help me out ?

Ana Galhoz

Hi,

Please find in the following https://www.kegg.jp/kegg-bin/get_htext?ko00001.keg the KEGG database, possible to download in txt format.

Hassan Bassereh

also have a look at http://cpdb.molgen.mpg.de/