Can anybody suggest me appropriate tool for aligning and assembly of 574 sequences of 68 Mb data together?

What is the difference between genotype and haplotype data in the ped format?

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27 February 2021 1,965 1 View

Are there any databases for gene co-expression or expression pattern clustering?

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How to calculate the Atomic Polar Tensor using DFT ?

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Useful architecture for bioinformatics?

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Does Gaussian 09W software take too long to give a result if we have a large chemical structure ?

DFT - gaussviev - gaussian09W - HOMO - LUMO

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Electron density difference maps(Fo-Fc): what is the meaning of negative densities (red blobs)?

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Endothelial Functional Assays & Conditions?

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Apart from MOFA what other software is available for analysis of a multi-omic study?

Study bringing together genomics, proteomics etc together

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In DFT or HF, is it more expensive to calculate the H matrix or to diagonalize it?

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Qiime2- No reads passed the filter. How to set the trunc value?

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30 January 2021 6,213 3 View

Ratnesh Tripathi

Thankyou for your suggestion...

May I know if galaxy takes PacBio long read partial assembled data of 68Mb for aligning and assembly?

Stephen Tsoi

I am not familiar with PacBio NGS plateform and not sure galaxy has deveopled long read from PacBio. You can send your question to them. If not, Lasergene from DNAStar will do. They have input data for PacBio. Talk to them. GoodLuck!

Thea Kosche

I had a look at the PacBio webpage and they give some suggestions. Here's the link: http://www.pacb.com/products-and-services/analytical-software/ and that's where one can download the software: http://www.pacb.com/support/software-downloads/ and here are some tutorials: http://www.pacb.com/products-and-services/analytical-software/devnet/

I hope this helps.