Hi all,

I'm using (or trying to use) Arlequin on Windows to run an AMOVA on some haplotypic data (mitochondrial genetic marker). I'm pretty certain the data is set up correctly - it reads in correctly and the groups are assigned correctly too. When I go to the "Settings Tab" and select the AMOVA analysis, I press start - nothing happens. No console pops up to make it seem like something happened, and no file is generated in the working directory.

I set up the file using the tutorial from the Banta Lab (https://sites.google.com/site/thebantalab/tutorials#h.c6sq8o45ens6) , I then followed the AMOVA set up (difference is I have haplotypic rather than genotypic data). When I noticed that nothing happens when I pressed start, I tried using the sample data from the tutorial but I am facing the same issue.

Has anyone had this problem before?

Thanks!