Any software to reconstruct a metabolic network based on genome knowledge (GSMr)?

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Mohammad Tarek

Cytoscape is the best with useful plugins for GSMr but there are plenty of databases and tools

http://metexplore.toulouse.inra.fr

MIRAGE (MetabolIc Reconstruction via functionAl GEnomics)

http://www.cs.technion.ac.il/~tomersh/methods.html

Marius K. Somda

Dear

I could add also these

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3361743/

http://brg.ai.sri.com/ptools/

https://omictools.com/metabolic-network-analysis-category

https://www.ncbi.nlm.nih.gov/pubmed/25267793