Timsy --

6 Questions 11 Answers 0 Followers

Questions related from Timsy --

Question regarding investigation of the nature of bacteria: whether it can cause human diseases or not?

Hi all, Considering that one has the whole genome sequence (annotated) of a bacterium and wants to know if it has the potential to cause human diseases, what steps would you recommend...

27 January 2021 8,884 3 View

How to test a methylotrophic bacterial strain for its capability to use methylamine?

Hi all, I have a novel species of bacteria which has the genes/enzymes responsible for carrying out methylotrophic activity. This strain can grow on methanol as well as methylamine (on the basis...

08 December 2020 1,700 2 View

EDGAR - How to add Whole genome sequence of the strain (novel) to EDGAR comparative genomic tool for comparison?

Hi all, I am interested to do a comparative genome analysis using EDGAR comparitive genomic tool. I have a novel bacteria whose genome sequence was obtained by us and now I was to do compare this...

11 November 2020 3,671 3 View

How to get 16srRNA gene sequence from whole genome sequence of a bacterial spp. digitally?

Hello Everyone, I have whole genome sequence of bacteria (which I want to prove as a novel spp. and 99% novel). I want to extract the 16s rRNA gene sequence from it digitally. What is the easiest...

05 May 2020 8,850 10 View

How to name a novel species of Pseudomonas. What are the guidelines?

Hello everyone, I need to know the criteria to provide the species name to a novel species of Pseudomonas which I discovered during my research. Could anyone let me know the latest version of how...

03 February 2020 10,046 3 View

Should I use 16S RNA sequence of Type strain of bacteria to create a phylogentic tree?

I am interested to make a phylogentic tree as a requirment to prove my putative novel bacterial species. I would like to know if I should only take the Type-strain 16S RNA sequence of my related...

25 September 2019 5,678 11 View