In Dominant marker like AFLP and RAPD only dominant gene amplify but not recessive one. So what is difference between two allele that they are selectively amplified
The polymorphisms between individuals result from sequence differences in one or both of the primer binding sites, and are visible as the presence or absence of a particular RAPD band. Such polymorphisms thus behave as dominant genetic markers.
The sequence of the dominant and the recessive alleles are different. This causes the dominance of one. If the difference is in the bindingite of the primer (or primers), you won't get the band. (It occures if the primers are designed for only one allele.) You can get the recessive allele, if you use degenerated primers.
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Your post:
The polymorphisms between individuals result from sequence differences in one or both of the primer binding sites, and are visible as the presence or absence of a particular RAPD band. Such polymorphisms thus behave as dominant genetic markers.
Original:
The polymorphisms between individuals result from sequence differences in one or both of the primer binding sites, and are visible as the presence or absence of a particular RAPD band. Such polymorphisms thus behave as dominant genetic markers.