I'm looking for an SNP (rs497692), but when I insert the rs in the databases, it returns the alleles as T>A / T>C . But there is frequency for T and C . Not for A . Why?
I read somewhere that the frequency of an SNP for some of its alleles is very low that's why it is not reported.
For example, I saw that for SNP A>C,G --> The frequency for A and C is high, and their sum is almost equal to 1. Therefore, the frequency for the other alleles (G) has to be very low. But I still don't know why they have not mentioned it.
You found three alleles T (wild) A and C (mutants). While in the previous literature you found only two T and C and their frequencies. If there no information on the mutant A that means new mutation is detected by yourself.