Currently I was trying to computationally predict the structure of a protein which acts as a kinase inhibitor using the tool I-TASSER. But had a confusion with the selection of the results. Top 5 results appeared on the screen, first one showing the best confidence but was found in a less folded state compared to the other 4 structure. Other 4 structures were folded properly. Shall I go with the first model or use the other structures which had a better folding ability. What parameters I must use to choose the best among the 4 ?
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