Various human microbiomes exhibit in human genome and their location and their existence have a great importance to predict their nature of action to human.
Howard Junca
First try: Blast http://blast.ncbi.nlm.nih.gov/Blast.cgi https://en.wikipedia.org/wiki/BLAST
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Rashadul Islam
Thanks a lot for your kind attention but blast can't even evaluate data up to 1MB in size.
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Rashadul Islam
actually I want to align bacterial genome in human genome sequence. I mainly usad FASTA format.
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Noel Cabañas
Hi, You can use locally Blast.
http://www.ncbi.nlm.nih.gov/books/NBK52640/
or align with mauve, BLASTZ, LASTZ.
http://darlinglab.org/mauve/mauve.html
http://www.bx.psu.edu/miller_lab/
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