Where can I find VCF file of HIV study?

Manoj Kumar Gupta @Manoj_Gupta29

01 January 2015 1 914 Report

Does anyone know where I can download the VCF file obtained from HIV case studies.

Brian Thomas Foley

You would have to write to the authors of the study. Most HIV studies do not use the variant call format files.

Badges
Science topic

Similar topics
Bioinformatics
Bioinformatics and Computational Biology

More Manoj Kumar Gupta's questions See All

Open access journal for structural bioinformatics with Impact factors

Please suggest me name of SCI journals with impact factor of about 1.5 , which are free for structural biology. We have carried out simulation of the protein at 10 ns using GROMACS( Due to the...

10 November 2016 2,395 1 View

Ancestral of drosophila melanogaster?

I am doing evolutionary study of D. melanogestor genome. Which of the following should be treated as ancestral of drosophila melanogaster Drosophila erecta , Drosophila simulans or Drosophila yakuba

09 October 2016 1,265 1 View

Is there any free online server where i can do simulation of .pdb file of protein for more than 10 ns?

05 June 2016 1,880 5 View

How to do analysis with .xtc file in Gromacs?

Respected Members, I have generated md_0_1_noPBC.xtc and other related file using gromacs 5.0 . but I am stuck as md_0_1_noPBC.xtc is not opening with vmd . How to...

03 April 2016 8,140 4 View

How to perform permutation logistic regression in R?

How to perform permutation logistic regression in R.

10 November 2015 8,677 0 View

How do you retrieve Genotype Information from a .CEL file obtained from Gene Expression Omnibus in R?

See above

31 December 2014 3,885 5 View

How to learn more about SPSS and its Application?

I would like to learn more about SPSS and Its application especially in regards to data analysis. Please suggest me how I can learn more about it. Thank you so much.

11 August 2024 9,101 4 View

Can I base on reverse DNA sequences to perform alignment, convert to amino acids and GenBank submission?

I have reverse sequences (AB1 format), can I base on reverse DNA sequences to perform nucleotide alignment, convert nucleotides to amino acids and deposit the sequence in GenBank database?

11 August 2024 5,138 1 View

Baseline drift in HPLC? What causes this?

Hello, Why do i see this baseline drift when i compare my blank (black) to the sample (blue)? Any suggestions as to why this happened? Thank you!

11 August 2024 3,770 4 View

Text-Communication from the M1 Hand Area using BCI—and then there is Elon Musk?

Willett, Shenoy et al. (2021) have developed a brain computer interface (BCI) that used neural signal collected from the hand area of the motor cortex (area M1) of a paralyzed patient. The...

10 August 2024 7,180 0 View

Has anyone applied Python in the field of textile engineering for data analysis, automation, or smart textiles?

I'm currently exploring the application of Python in textile engineering, specifically in areas like data analysis, process automation, and the development of smart textiles. I'm interested in...

10 August 2024 7,429 2 View

Which Scopus Journal provides the most affordable fees?

"PUBLISHING IN A SCOPUS JOURNAL" Researchers are now at a cross road. The critical need to publish in a Scopus or ISI, etc journal is ever vital. Journal Publication fees must be submitted....

10 August 2024 8,621 1 View

Seeking Advice on Viability and Execution of Undergraduate Thesis Topic?

Hello everyone, I am currently developing a thesis proposal and would appreciate your input on its viability and how to effectively carry it out. My proposed topic is: "Does the perceived threat...

10 August 2024 8,992 0 View

How can I use the cif data obtained from rietveld refinement extracted via gsas2, for microstructural analysis using ETEX software?

09 August 2024 7,718 0 View

Who will be moral responsible for the death of thousands of people in the event of an earthquake?

Who will bear moral responsibility for the deaths of thousands of people in the event of an earthquake? Weeks and months remain before the onset of strong earthquakes that bring death to...

08 August 2024 6,134 12 View

How are iso-frequency contours plotted?

Let's say we have a standard, regular hexagonal honeycomb with a 3-arm primitive unit cell (something like the figure attached; the figure is only representative and not drawn to scale). The...

07 August 2024 1,937 1 View