Hello,

I am trying to setup a statistical model for a timecourse experiment. I have a total of 16 timepoints *7 before and 8 after treatment. I have 4 acclimation groups before treatment. At treatment, half the individuals from each group were treated with a protein inhibitor and all individuals are treated with a stress. Following treatment, I have 8 groups (inhibitor+stress, stress for each acclimation group). I have an unequal amount of measurements from each group at each time due to mortality and low quality data. This is not a repeated measures as each measurement is from a unique individual that was sacrificed. My data is non-normal as well possibly due to missing and low quality data. I read that I can use the average of each group to make up for the missing data points.

I have had great trouble trying to get each timepoint integrated in my model. I have tried analyzing by averaging all "before" and "after" timepoints for each group but it would be great to get results at higher resolution (point of the timecourse). I am using JMP but open to trying another program.

Any help you can provide here or point in a direction would be greatly appreciated!

Thank you!

*I forgot to add that I am missing data for a timepoint and some of the treatments do not have data for others.

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