What meaning is “Number of contacts < 0.6nm”in gromacs software?
I cannot find any meaning in the user manual of Gromacs.
Does it mean there exists strong interaction between atoms?
It's telling you the number of atom pairs that fall within 0.6 nm.
Strength of an interaction depends on an energetic evaluation.
Dear Justin, what is the neighboring list in Gromacs? is it the all pairs that are in the within radius of the cut off?
See manual section 3.4.2.
why choose 0.6 nm ?
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