I guess that depends on what extraction process you will use, and what effect water will have in the following processes - typically separation and analysis of the extracts. Freeze drying is simple, inexpensive and relatively easy, well accepted, but time consuming. It can help remove water whtat will impede your progress in later stages of your work. Alternatively, I have seen various extraction processes where water at >80°C is on extraction stage, often followed by an extraction with dichloromethane of the same substrate. Wet DCM is a challenge to dry / concenrate but not the worst.
Then answer to "best" really depends on what process you are using, and the limits / challenges of that process.
Karen A. Darbinyan Karen A. Darbinyan Hello, the 'substrate' for lyophilization are fragments of a marine sponge, which further have to be extracted using solvents of varying polarities.
Yes just freeze. For future and for real comparison of results you can use part dried, part frozen. And after that you will also have results for storage.
Well, I can't do that because I basically need to do extraction using different solvents, and the presence of water causes a lot of bumping when I dry the extract on rotary evaporator.
Each drying method has advantages and disadvantages. If not the cost, change the texture. If not the loss of valuable ingredients, it is a shrinkage. Regards,