What does Maximum likelihood estimate of Ts/Tr Bias tells us about and what is the significance of the values above and below 0.5.

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Kaushik Bhattacharjee

Estimate Transition/Transversion Bias (ML) in MEGA

This option estimates the Transition/Transversion bias parameters ê, ê1, and ê2 using the Maximum Likelihood method. ê is used as a parameter of the Kimura Two-Parameter model of nucleotide evolution and some others, while ê1 and ê2 are used by the Tamura-Nei 93 model. This is applicable only to nucleotide data (coding or non-coding).

Please also check the attached files.

Please also check the attached file.