Dear fellow scholars,

We are working with a specific group of projection neurons from the brainstem to the spinal cord, and we want to somehow label (genetically, immuno etc) its target neurons in the spinal cord. Have have 2 mouse lines which could be useful, one with cre expression in this group and some other cells, and one with both cre and flp expression in this group and only very few other cells. How can I map the output neurons?

Some ideas I already thought of - mostly for ex vivo preparations:

1) Stimulate the projection neurons (optogenetically, electrically etc) at high intensity to induce cFos expression in target neurons (possibly ex vivo in ACSF). To predominantly target monosynaptic outputs, mephenesin, a drug that diminishes polysynaptic transmission, or maybe change ACSF ion compositions could be done(?) Thoughts on this?

2) Certain viruses have recently been developed which do anterograde monosynaptic jumps. This has potential, but Im not sure how robust this is,and some issues are correctly targeting the neuron group with virus injection (specificity, coverage), and the need for adult animals (I prefer to study developmentally immature animals). Does anyone know any good viruses, that might be cre or flp or both specific?

3) Cre/Flp sensitive transgene mice that could be used?

Any ideas or pointers are welcome. Also criticism on my current ideas, especially cFos and polysynaptic blocking.

Best regards,

Anders

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