Autocorellation function - how is compute existance of hbond in GROMACS?

GROMACS version: 2018.4 GROMACS modification: No I have a question. I want to know one thing. How is computing autocorrelation function, because I am not sure about something. I try to calculate...

07 February 2021 9,525 1 View

What are the limits of determining metastability in the brain?

What are temporal limits in determining brain metastability? In other words, how long does the minimum length of the scan segment using fMRI have to be for the result to be of any value? I'm...

07 February 2021 2,380 2 View

Ansys Fluent- Velocity Inlet/ Pressure Outlet/ Symmetry/ Wall- how are the BC formulated from the viewpoint of mathematics?

Hello, I went through the Fluent Theory Guide and other Ansys learning resources, however I couldn't find the answers to the following issues. Let's discuss the problem on the example of a...

01 January 2021 1,686 3 View

Does Fluent/CFX use Reynolds-averaging when the viscous model is set to Laminar? What about icoFoam?

Hello, this question is not as trivial as it may seem. The Laminar model in Fluent/CFX is pretty stable even when the physics are not laminar at all (internal flow, Re=20k, bifurcations/pipe...

23 December 2020 4,848 3 View

How to measure volume per lipid in Gromacs?

I have a question. I want to measure the volume per lipid. I built a membrane with water and run the simulation for 300 ns. To measure the volume per lipid I used a .gro file from the simulation...

22 October 2020 2,282 3 View

Can I use repeated measures ANOVA for within-litter design developmental experiments?

I am planning a developmental experiment where I will treat neonatal mice and then I will perform test after they reach adulthood. I plan to use within-litter design as follows: I will use 12...

07 October 2020 8,539 13 View

How to compute the order parameter for the last carbon in lipid tail in membrane GROMACS?

01 August 2020 5,756 2 View

SAFT90 soccer match simulation protocol - how can i find audio record?

I am interested in simulating a soccer match using the SAFT90 protocol. While reading the papers that have used it, I understood that an audio track is required. Can anyone address me to where I...

20 March 2020 759 2 View

How can I learn parametrization by myself in molecular modelling?

Is it possible to learn parametrization by myself? Do you know some good books, videos about that? I found that https://www.ks.uiuc.edu/Training/Tutorials/science/ffTK/fftk-tutorial.pdf but I...

01 March 2020 8,688 4 View

How to apply DAPC (adegenet) on Geometry morphometry data?

Do you have some suggestions about how to apply DAPC (adegenet R package) analysis on the Geometry Morphometry dataset? The dataset contains 12 morphometric points characterized by XY...

09 February 2020 1,690 2 View

What can I do if my paper be rejected after acceptance!?

almost 10 days ago, we received an email indicating that our manuscript is accepted by the journal and wanted us to send the original file (from the editorial assistant). Now, after 10 days we...

16 December 2020 7,046 20 View

Do you know if the International Journal of Economics, Finance and Management Sciences (IJEFM) is a predatory journal?

That journal invited me to join their team as an Editorial Board/Reviewer a lot of times. But I want to make sure it's a reliable journal. I checked it, it is not on the List of Predatory Journals.

30 October 2020 6,662 3 View

Can the member of editorial board of a research journal also serve as a reviewer of a submitted manuscript?

I face a confusion whether a member of editorial board of a research journal also serve as a reviewer of a submitted manuscript? What is the international standards?

26 October 2020 6,125 4 View

Why affiliation is important to Publish research work ? How the self-made researchers used to communicate ?

In the course of work-from home for more than a year, a work done completely at home needs institute affiliation or home's address ? How this works for the early stage researcher's who are very...

11 October 2020 2,334 3 View

Is Plants published by MDPI a serious journal?

I was recently invited to edit a special issue for Plants by the MDPI publisher. I know no one from my field in their editorial board. I have no experience with MDPI journals either but based on...

17 September 2020 607 8 View

Do Editors of All High Impact Open Access Journals Treat Submissions from LIC Fairly?

Many Open Access journals put the policy of waiving Article Processing Charges for authors from low income countries (LIC). But, in some cases, two things often happen. (1) The review of...

31 August 2020 1,694 14 View

Why despite the fact that researchers are willing to put their names on a new journal's editorial board, the journal only receives 1-2 articles?

For example journals with a total number of 45 people (editors, associate editors, executive editors and editors in chief) are struggling to publish 2 papers per year, while if those people...

06 August 2020 496 5 View

Anyone interested in joining as an editorial team member or a reviewer for a new journal?

31 July 2020 3,410 3 View

For what reasons a Peer Review of an article can be rejected/cancelled or called back by a member of the editorial team of a journal?

Some times it happens that the Peer Reviewers take a long time to reply to editor's request to review or to actually review an article sent to them for review. The Reviewer may have conflict of...

14 July 2020 9,221 3 View

Is there anyone who can help for English language editing of my manuscript?

Hello Sir/Ma'am, I am Dr Kamlesh Kumar Maurya from India, Sir/Ma'am one of my manuscript is under awaiting position, only because of its standard of English. In this phase editorial in Chief given...

29 June 2020 3,418 14 View