01 January 1970 1 3K Report

Hello everyone,

I am a new PhD student starting a project on microRNAs (miRNAs) in myocardial infarction (MI) patients. I would greatly appreciate any guidance on the following points to ensure proper sample collection, storage, and analysis:

  • Blood Collection Tubes:Which type of blood collection tubes are best suited for miRNA isolation? Should I use EDTA, heparin, or another type of tube?
  • Sample Handling:What are the best practices for handling blood samples immediately after collection? How soon should the blood be processed after collection to ensure miRNA stability?
  • Storage Conditions:How should the blood samples be stored before processing for miRNA isolation? If immediate processing is not possible, what are the recommended storage temperatures and durations for whole blood, plasma, or serum?
  • miRNA Isolation:What are the recommended protocols or kits for miRNA isolation from blood samples? Are there specific steps or considerations to prevent RNA degradation during isolation?
  • Concurrent Biomarker Analysis:Can the same blood samples be used for other biomarker assays such as BNP and collagen turnover markers? If so, how should I aliquot the samples to ensure there is enough material for multiple assays?
  • Storage of Processed Samples:How should isolated miRNA be stored until analysis? Are there specific conditions (e.g., -80°C) and storage buffers required for long-term storage?
  • Biomarker Measurement Protocols:What are the best practices for measuring BNP and collagen turnover markers in blood samples? Are there any specific ELISA kits or assays recommended for these biomarkers?
  • Data Integration:How can I effectively integrate miRNA data with biomarker measurements and clinical data (e.g., ECG, echocardiograms)? Are there any statistical tools or software that you recommend for this type of multi-dimensional data analysis?
  • Literature and Resources:Can you suggest any key papers, protocols, or online resources that could help me understand and implement these techniques effectively? Are there any specific training courses or workshops you recommend for a beginner in this field?
  • Your guidance will be instrumental in helping me get started on my PhD project.

    More Reshmi Pb's questions See All
    Similar questions and discussions