Running average in xmgrace?

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What does negative readings in spectrophotometer denote. Was testing TSS content of bacterial cultures?

I was performing estimation of Total Soluble Sugar content in bacterial cultures by Anthrone method. Out of 9 samples, only one sample showed positive reading while others had a negative reading...

22 July 2024 9,576 4 View

Does plant based medicine have less side effects?

I was reading papers on plant secondary metabolites and their applications and many of the papers/books I read, have the point that plant-based medicines which are the result of application of...

08 July 2024 9,935 10 View

Hey everyone. I am facing some problems while transfecting A172 cell line with three plasmids for Dual Luciferase Assay. Any suggestions?

(Transfection with two plasmids has worked for this cell line. pRL-TK(Renilla) is not getting transfected).

16 June 2024 6,687 2 View

Are the frequencies extracted from SdH oscillations nearly the same for different cemical substituted samples?

Generally, the chemical substitution should adjust the Fermi level, and the computed TSS indeed suggests that the Fermi pocket for the three samples different, so why are the frequencies extracted...

17 May 2024 1,897 1 View

Computed TSS seems to suggest that the sample should have stronger sdH oscillations, whereas experimentally extracted SdH oscillation is weak?

The sample nature is thin film

17 May 2024 8,459 0 View

How to define t shape gate structure in silvaco atlas?

I want to define T shape gate I added material air in free space , But it is showing boundry condition not defined electrode num=3 name=gate mat=gold x.min=2.6 x.max=3.5 y.min=0.03...

13 May 2024 3,059 0 View

Does age of a bacterial culture have an impact on its DNA isolation?

Generally for bacterial DNA isolation we use a fresh culture of 2-5 days old. But if we use an older culture say 10-15 days old will it have any impact on the DNA content and the DNA isolation...

13 May 2024 3,061 11 View

How to define t shape gate structure in silvaco atlas?

I want to define T shape gate I added material air in free space , But it is showing boundry condition not defined electrode num=3 name=gate mat=gold x.min=2.6 x.max=3.5 y.min=0...

13 May 2024 5,026 0 View

When can the fitting of the fluorescence anisotropy decays have the negative component ?

it would be helpful if you provide the reference to your answer

11 May 2024 5,989 4 View

What concentration of Nystatin should be used in Nutrient Agar medium?

I'm isolating bacterial from soil on Nutrient Agar media but after 4-5 days I see fungal growth start in the plates. I read about use of Nystatin to prevent fungal growth. How much quantity or...

21 April 2024 6,039 5 View

Can any one help some suggestion on how to resolve Grace:console error please?

I am plotting 3 different RMSDs graphs using xmgrace but it gives Grace: console log in such a way that i can't edit the legend of the graphs. Any suggestions will be highly appreciated. Thanks

05 March 2024 8,341 0 View

How to plot Orbital Resolved band structure of materials using xmgrace?

I am using ELK-FPLAPW code to compute band structure of some materials. From the output files, I can plot l (or m_l) resolved band structure using Origin-Pro. But since I have the license of this...

06 November 2023 9,232 3 View

Hydrogen Bond in GROMACS ?

I have performed GROMACS , For 1ns, 10 ns and 100ns I got proper RMSD, RMSF, RG but hydrogen bond for 100ns is not clear , 1ns and 10ns its totally fine In Xmgrace the graph is blank , The VMD...

19 July 2023 8,689 5 View

Why the graph of phonon calculated Quantum espresso and ploted by xmgrace exihibts kinks?

I calculated phonon by quantum espresso and plotted via xmgrace, my graph exhibits kink corners instead of smooth. What will be the consequence?

16 June 2022 6,214 2 View

Is there any way/tools to interepret the molecular dynamics simulation results beside XmGrace?

I have done MD simulation and want to interpret and plot the data from the files. As my PC did not have enough specs for Dual boot OS because the XmGrace tool is supported only on Linux. Though, I...

25 April 2022 4,254 3 View

Why the dat files cannot be opened properly in xmgrace?

Hi, I did not know really much about xmgrace, so there's an unsolved problem I got: I wanted to open and plot the data within a dat file in xmgrace. I clicked Menu Data --> Import --> ASCII -->...

16 August 2020 2,459 2 View

Ask for help about wannier90, hopping matrix elements are not complex conjugate?

Dear All, I calculate band structure and hopping matrix of monolayer Graphene by using wannier90-2.0.1. There are two atoms in one unit cell, the following is input information : INCAR :...

26 February 2020 5,161 1 View

I am new user of xmgrace and i am trying to plot moving average of 3 data sets in a single graph. can anyone suggest me how i can perform it?

i have 3 data sets of 501 frames each and want to get a moving average of all 3 graphs in a single graph. i am able to lot all 3 graphs in one but unable to get a moving graph through xmgrace. any...

08 September 2019 2,965 1 View

How do you place a gap on the y-axis in XmGrace?

Hi! I have a graph with multiple line plots. All but one of the lines are clustered together, such that they appear as a single line; because of the huge difference in the values of one of the...

26 October 2018 4,034 5 View

How to plot the histogram.xvg file obtained from GROMACS REMD?

I am having difficulty in plotting the histogram.xvg file obtained from REMD using xmgrace. Can I plot it with matlab? if yes please help.

09 October 2018 7,296 1 View