How to assign atomic charges on bio-molecules which were built by a Glycam Carbohydrate builder? The (.pdb) files generated by carbo-builder are without charges of the atom,?
Dear Sharmi! I strongly recommend that you study the original works of Charles Coulomb, Poisson and Thomson ... In these works you will unexpectedly discover amazing news - it turns out that these physicists did not understand the "charge" as modern physics teachers present us today - their "charge" was determined as "a mass of electricity" or "as a mass of an electric fluid" ... Who perverted Coulomb's teaching? Maxwell did it ... In 1899, the German physicist Schreber wrote his article in which he defeated Maxwell and his followers, but Jewish physicists who wanted to dominate ignored this article by Schreber ...
Die Jfaasse der elektrischen Grössen, 1899 - https://cloud.mail.ru/public/2ZuE/6EhstsLjG
Die Jfaasse der elektrischen Grössen, 1899 - https://drive.google.com/file/d/1pycW7ZbeySLqgiopQUlNn3QzGK-6KBIZ/view?usp=sharing
Thus, in the modern sense, today we can state the following - all "electrostatic experiments" by Charles Coulomb are easily described by the magnetic properties of free electrons, which form clusters on the surface of "electrified bodies" - these are a kind of temporary magnets ... Why so? And because the electron has its own magnetic field, its own magnetic poles and its own magnetic moment. If free electrons are turned by their north magnetic field to the surface of the body, then the north magnetic pole is formed there ... Therefore, if there is a body nearby, on the surface of which there is also the north magnetic pole, then the bodies will repel - this is the reason for the deflection of the arrow in the electroscope ... In turn, if there is a body next to it with a south magnetic pole on the surface of the body, the tala will be attracted ... This means the following - there has never been a notorious "charge" on the electron and proton! Charles Coulomb was perverted ... In the modern sense, the "mass of an electric fluid" is the mass of free electrons ... In turn, the proton also has its own magnetic field, its own magnetic poles and its own magnetic moment. For this reason, the proton plays a leading role in magnetic interactions and, most importantly, due to this property, all nuclear reactions occur - they are of a magnetic nature. Read my articles -
Physicist Charles Coulomb and Cavendish, 15 September 2020 – https://cloud.mail.ru/public/4MUd/Ao4WCYyFq
Physicist Charles Coulomb and Cavendish, 15 September 2020 – https://drive.google.com/file/d/1vBeRJDpISIo5eLOpJD_CliBN65DWsrpu/view?usp=sharing
Correspondence with Igor Nikolaevich Stepanov dated June 22, 2020 – https://cloud.mail.ru/public/1mSx/2ti91GWkP
Correspondence with Igor Nikolaevich Stepanov dated June 22, 2020 – https://drive.google.com/file/d/1g2vLhzFADkW1Va1AqE24SLrq5ADwlehP/view?usp=sharing