I have several microscope images taken from a confocal microscope that I plan to analyze further, but I was wondering if anyone had suggestions on how to enhance the image quality with an online program (something that can delineate tissue borders to illuminate areas of interest). Any help would be appreciated.
Hello Michael, As you put a question here, I am sure after sometime, a person named as John Sosa will come here and will say you should try his software MIPAR (don't mind John just kidding). before he will say , I am saying you can try MIPAR.
http://www.mipar.us/
Hello Michael, As you put a question here, I am sure after sometime, a person named as John Sosa will come here and will say you should try his software MIPAR (don't mind John just kidding). before he will say , I am saying you can try MIPAR.
http://www.mipar.us/
Hello, Michael Jeffrey Cimorelli:
I hope the codes in the following links could help you:)
https://cn.mathworks.com/matlabcentral/fileexchange/56365-generalized-framework-cell-segmentation
https://cn.mathworks.com/matlabcentral/fileexchange/59039-cell-segmentation-generalized-framework
Hi Michael,
You could also have a look at FIJI (IMAGE J)
https://fiji.sc/
Freely available, many plugins, and interoperability with Matlab is possible
Hi, Michael. Can you try CEllProfiler (http://cellprofiler.org/)
Thanks for the recommendation Kaleem! I do recommend MIPAR. As we are growing we'll have some new folks on here trying to spread the good word since I am sure you are sick of me!
Seriously Michael, submit an image anytime to http://mipar.us/try-image, or post an image here and I'll send you a MIPAR recipe file to do he analysis you need.
Cheers,
John
Hi John I submitted an image to MIPAR submission but you did not send to me the result
regards
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