12 December 2013 2 10K Report

Computational approach

More Hari ram Meghwal's questions See All
Any successful story for the bio-degradation of Thiocyanate from laboratory to Field ?

Because many scientist groups are working on this problem. Success rate at laboratory level had been reported but at field level hardly we will find any story.

10 November 2017 9,090 0 View

Anyone familiar with MD simulatios using Gromacs ?

I have a .pdb file, in this file when I want to use pdb2gmx command> there is this error massage:> Fatal error:> Incomplete ring in HIS680Ask What should to do?

06 July 2015 5,225 12 View

Can anyone help with MD simulations using Gromacs?

During add ions steps using Gromacs the overall charge on my protein was calculated qtot -35 So i have to add positive ions to neutralize the charge on protein. then i have added 35 Na ions using...

06 July 2015 4,637 3 View

MD simulatios using Gromacs?

During MD simulations i got fatal error during energy minimization step after commend: gmx grompp -f minim.mdp -c 2HQA_modified_solv_ions.gro -p topol.top -o em.tpr Fatal error:number of...

06 July 2015 2,032 2 View

How do I study molecular dynamic simulations of a subunit of housekeeping protein of bacteria at different temperature using GROMACS software?

I want to study the role of different structural factors which helps in stability and activity of Enzyme in different habitat. they have basic level of similarity  in amino acids sequence (40%)

06 July 2015 5,303 1 View

MD simulations using Gromacs?

During MD simulations i got fatal error during energy minimization step after commend: gmx grompp -f minim.mdp -c 2HQA_modified_solv_ions.gro -p topol.top -o em.tpr Fatal error:Too many warnings...

06 July 2015 6,137 4 View

Does anyone know how to operate GROMACS software for analysis of molecular dyanamic simulations using ubantu operating system ?

  i wanted to determine molecular dynamics of a protein at  different  temperature.

06 July 2015 4,253 3 View

Can someone help me to short out the problem regarding smear on gel of PCR product?

I used gene specific primer to amplified the gene which is almost 4000 kb in length  but i got smear on gel after trying the Mgcl2 gradient and Tm gradient. I got smear  with Mgcl2 conc= 3.5,...

07 August 2014 2,263 8 View

Xylanase bacterial enzyme

I am just starting work on xylanase. Can you suggest an appropriate site for sample collection of xylanase?

05 June 2012 2,593 6 View

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