The current Legionella pneumophila SBT databse ( http://bioinformatics.phe.org.uk/legionella/legionella_sbt/php/sbt_homepage.php / http://www.ewgli.org/ ) maintaint by Public Health England’s Bioinformatics Unit is down for the past 2 months, and no email replied from their listed email.
Is there any other database I can refer to, I stuck in the middle of my study.
Thanks
The website is not active, but you can still access it from archives. Download any useful data promptly.
https://webarchive.nationalarchives.gov.uk/20190501130700/http://bioinformatics.phe.org.uk/legionella/legionella_sbt/php/sbt_homepage.php
https://webarchive.nationalarchives.gov.uk/*/http://bioinformatics.phe.org.uk/legionella/legionella_sbt/php/sbt_homepage.php - choose archive version from here.
Thanks Abhijeet Singh for the useful info, I have the reference sequence downloaded previously, but I am not able to query the database with my sequence result to match the sequence type.
Is there any other known database for Legionella pneumophila?
Thanks.
Make a local blast database with reference sequence and use it against your query.
- Badges
- Science topic
- Similar topics
- Computer Science and Engineering
- Bioinformatics